RSBE² Papers

2026

  • Choquel, C., Geslin, E., Metzger, E., Jesus, B., Prins, A., Houliez, E., Schweizer, M., Jauffrais, T., Bénéteau, É., & Mouret, A. (2026). Seasonal dynamics of mudflat foraminifera linked to diatom species and traits. Journal of Micropalaeontology, 45(1), 51‑72. https://doi.org/10.5194/jm-45-51-2026 
  • Davies, B. F. R., Oiry, S., Roca, M., Rosa, P., Zoffoli, M. L., Poursanidis, D., Dolch, T., Ondiviela, B., Galván, C., Brito, A. C., Lilley, R. J., Govers, L. L., Gade, M., Barillé, L., & Gernez, P. (2026). An initial map of European intertidal seagrass. Remote Sensing of Environment, 333, 115116. https://doi.org/10.1016/j.rse.2025.115116 
  • Davies, B. F. R., Oiry, S., Roca-Mora, M., Gade, M., Stiger-Pouvreau, V., Barillé, A.-L., Le Bris, A., Gernez, P., & Barillé, L. (2026). Mapping the distribution of an intertidal invasive red macroalga at a national scale using satellite remote sensing. Remote Sensing Applications: Society and Environment, 43, 102109. https://doi.org/10.1016/j.rsase.2026.102109 
  • Debly, A., Davies, B. F. R., Oiry, S., Deloffre, J., Rosa, P., Petit, A., Boulinguez, J., Barillé, L., & Méléder, V. (2026). Intra-pixel scaling bias in satellite data for coastal monitoring: Evidence from photosynthetic biofilms. Ecological Informatics, 97, 103953. https://doi.org/10.1016/j.ecoinf.2026.103953 
  • Déléris, P., Petit, K., Nazih, H., & Bard, J.-M. (2026). Chapter 10—Seaweeds in human health. In J. Fleurence & I. A. Levine (Éds.), Seaweed in Health and Disease Prevention (Second Edition) (p. 383‑445). Academic Press. https://doi.org/10.1016/B978-0-443-29827-1.00021-2 
  • Desparmet, A., Jesus, B., Robinet, T., Dufour, T., & Hubas, C. (2026). Reactive oxygen species trigger downward vertical migration in diatom microphytobenthic biofilms as a strategy to cope with oxidative stress. The ISME Journal, 20(1), wrag034. https://doi.org/10.1093/ismejo/wrag034 
  • Dias, J.-Y., Pochic, V., Chaffron, S., & Gernez, P. (2025). Diatoms vs dinoflagellates: A temporal network analysis of bloom impacts on diversity and phytoplankton community structure in French coastal waters (p. 2025.06.26.661744). bioRxiv. https://doi.org/10.1101/2025.06.26.661744 
  • Ferreira, A., Costa, R. R., Jesus, B., Brito, A. C., Silveira, S. B., Brotas, V., Guerreiro, C. V., Secchi, E. R., & Mendes, C. R. B. (2026). Photoacclimation of cryptophytes and diatoms to light variability in the Western Antarctic Peninsula. Journal of Phycology, 62(2), 643‑665. https://doi.org/10.1111/jpy.70158 
  • Gamage, N. D., Déléris, P., Tirichine, L., Wielgosz-Collin, G., Lebeau, T., Mossion, A., & Méléder, V. (2026). Characterising key bacterial taxa of the benthic diatom Amphora sp. Biofilms in a porous substrate photobioreactor. Bioresource Technology Reports, 34, 102686. https://doi.org/10.1016/j.biteb.2026.102686 
  • Gamage, N. D., Mossion, A., Khan, M., Karim, R., Rabesaotra, V., Wielgosz-Collin, G., Lebeau, T., & Méléder, V. (2026). Co-culturing bacteria with monospecific microalgal biofilms for improved biomass and lipid production. Journal of Biotechnology, 414, 111‑123. https://doi.org/10.1016/j.jbiotec.2026.03.007 
  • Gleni, K. E., Jesus, B., Davies, B. F. R., Pavlidis, M., & Barillé, L. (2026). Evaluation of Post-Mortem Colour Changes in Fish Eye, Gills and Skin Using Hyperspectral Imaging. Aquaculture Research, 2026(1), 2363342. https://doi.org/10.1155/are/2363342 
  • Guinle, C., Levasseur-Garcia, C., Poirier, L., Déléris, P., & Zalouk-Vergnoux, A. (2026). Near-infrared spectroscopy for rapid and non-destructive assessment of PFAS effects in blue mussels (Mytilus spp.): A proof-of-concept study. Marine Pollution Bulletin, 233, 120117. https://doi.org/10.1016/j.marpolbul.2026.120117 
  • Guinle, C., Visaliyil, H. J., Delannoy, V., Bely, N., Baratange, C., Cognie, B., Mossion, A., Wielgosz-Collin, G., Bertrand, S., Montiel, G., Aminot, Y., Munschy, C., Poirier, L., Déléris, P., & Zalouk-Vergnoux, A. (2026). Unveiling the subchronic effects of PFAS mixtures in blue mussels (Mytilus spp.): An integrative assessment from molecular to physiological levels. Marine Pollution Bulletin, 232, 120109. https://doi.org/10.1016/j.marpolbul.2026.120109 
  • Humphrey, S., He, X., Priemel, T., Titze, V., Perea-Puente, S., Subramanian, V., Bouchet-Marquis, C., Jesus, B., & Vignolini, S. (2026). Nudibranch color diversity shares a common physical basis in guanine photonic structure ‘pixels’. Proceedings of the National Academy of Sciences, 123. https://doi.org/10.1073/pnas.2525419123 
  • Jesus, B., Cartaxana, P., & Williamson, C. (2026). pamfit: A new R package for spatially resolved analysis of Imaging PAM photosynthesis–irradiance light curve parameters. Limnology and Oceanography: Methods, 24(2), e70011. https://doi.org/10.1002/lom3.70011 
  • Landebrit, L., Guillon, M., Muresan, B., Poirier, L., & Gasperi, J. (2026). Tire and road wear particles in soils: From roadside soil to widespread impregnation. Environmental Research, 300, 124430. https://doi.org/10.1016/j.envres.2026.124430 
  • Le Guernic, A., Croiset, C., Réthoré, B., Chapuis, J., Latchere, O., Metais, I., Neury-Ormanni, J., Grémiaux, A., Phuong, N. N., De Bastos Oliveira, D., Zalouk-Vergnoux, A., Baltzer, A., Gasperi, J., & Châtel, A. (2026). First Assessment of Microplastic Contamination from the Source to the Estuary of the Loire River (France) using Two Analytical Methods. Water, Air, & Soil Pollution, 237(16), 927. https://doi.org/10.1007/s11270-026-09605-y 
  • Lecordier, E. M., Gernez, P., Mazik, K., Clark, E., & Forster, R. M. (2026). Identifying suitable mussel cultivation sites in European offshore waters—An assessment for co-location with the wind industry. Npj Ocean Sustainability, 5(1), 20. https://doi.org/10.1038/s44183-026-00187-0 
  • Lortholarie, M., Poirier, L., Lebeau, T., Coynel, A., & Zalouk-Vergnoux, A. (2026). Rare earth elements in the Loire Estuary (France) : Environmental and health risk assessment. Marine Pollution Bulletin, 233, 120208. https://doi.org/10.1016/j.marpolbul.2026.120208 
  • Mafra, L. L., Sobrinho, B. F., Martínez, A., Lubiana, K. M. F., Maciel, R. V., Bersano, J. G. F., Fernandes, L. F., Kaviatkovski, F., Rodrigo, P. A., Zem, R. C., Tibiriçá, C. E. J. de A., Schramm, M. A., Alves, T. P., Hoff, R., Pochic, V., Besnard, Z., Gernez, P., & Noernberg, M. A. (2026). Large-scale toxic bloom of Dinophysis acuminata complex following a major flood disaster in southern Brazil. Harmful Algae, 158, 103177. https://doi.org/10.1016/j.hal.2026.103177 
  • Martin, S., Gernez, P., Bryère, P., Mayot, N., Rigaud, S., & Doxaran, D. (2026). A decade of Sentinel-2 observations for Water Framework Directive assessment in an anthropized coastal lagoon: The Berre Lagoon (France). Ecological Indicators, 190, 115261. https://doi.org/10.1016/j.ecolind.2026.115261 
  • Mogeon, J., Le Mer, G., François, Y., Danis, A., Poirier, L., Amiot, C., Decottignies, P., & Zalouk-Vergnoux, A. (2026). Multi-scale assessment of metal and metalloid contamination and bioaccumulation in clams (Ruditapes spp.) along the French coasts: Implications for environmental and human health risks. Environmental Science and Pollution Research, 33(20), 10032‑10058. https://doi.org/10.1007/s11356-026-37910-w 
  • Oiry, S., Davies, B. F. R., Rosa, P., Debly, A., Zoffoli, M. L., Barillé, A.-L., Harin, N., Román, M., de Fouw, J., Gernez, P., & Barillé, L. (2026). Heatwave impacts on intertidal seagrass reflectance: From laboratory experiment to satellite mapping of seagrass heat shock index. Remote Sensing of Environment, 335, 115248. https://doi.org/10.1016/j.rse.2026.115248 
  • Ratmaya, W., Andrieux-Loyer, F., Rabouille, C., Collin, K., Caradec, F., Laverman, A. M., Barillé, L., & Souchu, P. (2026). Impacts of phytoplankton blooms on the benthic phosphorus cycle in a coastal ecosystem (Bay of Vilaine, France). Marine Environmental Research, 220, 108182. https://doi.org/10.1016/j.marenvres.2026.108182 
  • Roca-Mora, M., Davies, B. F. R., Gernez, P., Zoffoli, M. L., & Barillé, L. (2026). Beachcast degradation stages of Rugulopteryx okamurae and Zostera noltii: Towards a scalable remote-sensing monitoring platform. Remote Sensing Applications: Society and Environment, 43, 102108. https://doi.org/10.1016/j.rsase.2026.102108 
  • Román, M., Davies, B. F. R., Rosa, P., Oiry, S., Gernez, P., Santiago, J. A., Olabarria, C., & Barillé, L. (2026). From pixels to peaks: Integrating LiDAR and RGB drone imagery to map mussel spat on intertidal rocky shores. Estuarine, Coastal and Shelf Science, 329, 109671. https://doi.org/10.1016/j.ecss.2025.109671 
  • Serre, N., Singh, R. R., Boulard, L., Zalouk-Vergnoux, A., & Aminot, Y. (2026). Towards reliable semi-quantification of PFAS in aquatic biota: A similarity-based approach and practical recommendations. Talanta, 310, 130056. https://doi.org/10.1016/j.talanta.2026.130056 
  • Zoffoli, M. L., Pochic, V., Bresciani, M., Braga, F., Lacour, T., Retho, M., Manach, S., Röttgers, R., Detoni, A. M. S., Harmel, T., Oiry, S., & Gernez, P. (2026). Toward elucidating accessory pigments in intense phytoplankton blooms using hyperspectral satellite remote sensing in support of harmful algal bloom (HAB) monitoring. Remote Sensing of Environment, 341, 115439. https://doi.org/10.1016/j.rse.2026.115439 

2025

  • Baratange C, Rocha de Almeida T, Armengaud J, Bonnard I, David E, Delahaut L, Gaillet V, Guillon E, Kielbasa M, Loizeau JL, Maurin N, Sayen S, Cosio C (2025). Molecular and genotoxic effects of carbamazepine and methylmercury on the gonads of Dreissena polymorpha. Aquatic Toxicology, 287:107493. https://doi: 10.1016/j.aquatox.107493
  • Barillé, L., Paterson, I. L., Oiry, S., Aris, A., Cook-Cottier, E. J., & Nurdin, N. (2025). Variability of Kappaphycus alvarezii cultivation in South-Sulawesi (Indonesia) related to the monsoon shift: Water quality, growth and colour quantification. Aquaculture Reports, 40, 102557. https://doi.org/10.1016/j.aqrep.2024.102557
  • Cai B., Gandon L., Baratange C., Eleyele O., Moncrieffe R., Montiel G., Kamari A., Bertrand S., Duran M-J, Poirier L, Deleris P., Zalouk-Vergnoux A. (2025). Assessment of the effects of cadmium, samarium and gadolinium on the blue mussel (Mytilus edulis): A biochemical, transcriptomic and metabolomic approach, Aquatic Toxicology, 279, 107217, https://doi.org/10.1016/j.aquatox.2024.107217.
  • Croiset C., Dhivert E., Phuong N.N., Grosbois C., Zalouk-Vergnoux A., Baltzer A., Gasperi J. (2025). Main drivers for microplastic records in river sediments since the 1950s: Case study of the Loire river (France). Science of The Total Environment 994, 180059, https://doi.org/10.1016/j.scitotenv.2025.180059
  • Guinle C., Wiranda Gurning R., Baratange C., Cognie B., Mossion A, Wielgosz-Collin G., Bertrand S., Montiel G., Poirier L., Déléris P., Zalouk-Vergnoux A. (2025).
    Integrating multi-level approaches to assess blue mussel (Mytilus spp.) responses to short-term temperature and salinity changes. Marine Environmental Research. 211, 107436, https://doi.org/10.1016/j.marenvres.2025.107436.
  • Jesus B., Cartaxana P., & Williamson C. (2025). pamfit: A new R package for spatially resolved analysis of Imaging PAM photosynthesis–irradiance light curve parameters. Limnology & Oceanography: Methods. https://doi.org/10.1002/lom3.70011 
  • Lecordier, E. M., Gernez, P., Mazik, K., York, K., & Forster, R. M. (2025). Quantification of turbid wakes in offshore wind farms using satellite remote sensing. Science of The Total Environment, 967, 178814. https://doi.org/10.1016/j.scitotenv.2025.178814
  • Le Strat Y., Ruiz N., Déléris P., Robiou du Pont T., Bertrand S., Debaets S., Burgaud G. , Dumay J. (2025). An exploratory study of species richness and dynamics in the cultivable mycobiota of Palmaria palmata. Fungal Ecology, 75, 101417. https://doi.org/10.1016/j.funeco.2025.101417
  • Madariaga, G. P. M., Falcou-Prefol, M., Oiry, S., Zoffoli, M. L., Fleurence, J., Gernez, P., & Barillé, L. (2025). Site selection for off-shore macroalgae aquaculture on the French Atlantic coast. Aquacultural Engineering, 111, 102581. https://doi.org/10.1016/j.aquaeng.2025.102581
  • Mahfoudhi G., Barhoumi B., Velazquez-Gomez M., Al-Rawabdeh A.M., Touil S., Driss M.R., Zalouk-Vergnoux A.,Lacorte S. (2025). Past and present contaminants in sediment samples collected from Bizerte lagoon and inflowing rivers, Tunisia: Occurrence and potential risks.Environmental Pollution, 384, 126926. https://doi.org/10.1016/j.envpol.2025.126926
  • Martin S., Bryère P., Gernez P., Renosh P.R., Doxaran D. (2025). Towards reliable high-resolution satellite products for the monitoring of chlorophyll-a and suspended particulate matter in optically shallow coastal lagoons. Remote Sensing, 17, 3430. https://doi.org/10.3390/rs17203430 
  • Napper I.E., Davies B. F. R., Erskine A., Thompson R.C., Yates R., Koldewey H. (2025). Citizen science reveals litter trends in the UK: Population density effects on coastal and inland regions, Marine Pollution Bulletin, 117634, https://doi.org/10.1016/j.marpolbul.2025.117634.
  • Oiry, S., Davies B. F. R., Stiger-Pouvreau V., Gernez P., & Barillé L. (2025). Mapping the distribution of the alien invasive Gracilaria vermiculophylla at the site of its first European introduction. Journal of Environmental Management, 392, 126726. https://doi.org/10.1016/j.jenvman.2025.126726
  • Quintana, C. O., Méléder, V., Sousa, A. I., Drakou, E. G., van der Wal, D., Krause-Jensen, D., & Andreu-Boussut, V. (2025). Coastal rewilding as a nature-based solution. Frontiers in Marine Science, 11, 1547177. https://doi.org/10.3389/fmars.2024.1547177
  • Román M., Davies B. F. R., Oiry S., Rosa P., Gernez P., Olabarria, C., & Barillé L. (2025). Discrimination of the intertidal goose barnacle Pollicipes pollicipes from rocky shore invertebrates and macroalgae using in situ hyperspectral signatures. Remote Sensing Applications: Society and Environment, 101697. https://doi.org/10.1016/j.rsase.2025.101697
  • Serre, N., Singh, R.R., Munschy, C., Zalouk-Vergnoux, A., Aminot, Y. (2025). Suspect Screening of PFAS in French Coastal Bivalves: In-Depth Detection and Annotation Using Aqueous Film-Forming Foams. Environ. Sci. Technol. 59, 19992-20004. https://pubs.acs.org/doi/10.1021/acs.est.5c05758
  • Zoffoli M.L., Brando V., Volpe G., González Vilas L., Davies B.F.R, Frouin R., Pitarch J., Oiry S., Tan J., Colella S., Marchese C. (2025). CIAO: A machine-learning algorithm for mapping Arctic Ocean Chlorophyll-a from space, Science of Remote Sensing, 11, 100212, https://doi.org/10.1016/j.srs.2025.100212.

2024

  • Alevizos E, Nurdin N, Aris A, Barillé L., 2024. Proximal Sensing for Characterising Seaweed Aquaculture Crop Conditions: Optical Detection of Ice-Ice Disease. Remote Sensing. 2024; 16:3502. https://doi.org/10.3390/rs16183502
  • Amit T, Beninger P G, Yahel G., and Loya Y., 2024. The Perks of Life as a Coral-Boring Bivalve. Bulletin Ecological Society of America  https://doi.org/10.1002/bes2.2177 
  • Amit T, Beninger P G, Yahel G., and Loya Y., 2024. Coral hosts provide more than shelter to boring bivalves. Ecology 105(8): e4376  https://doi.org/10.1002/ecy.4376 
  • Argyriou AV, Tektonidis N, Alevizos E, Ferentinos KP, Kourgialas NN, Mathioudakis MM. Precision Farming Multimodal Technologies Using Optical Sensors for the Detection of Citrus Tristeza Virus Endemics. Sustainability. 2024; 16:5748. https://doi.org/10.3390/su16135748  
  • Arnaldo, M. D. G., Gamage, N. D., Jaffrenou, A., Rabesaotra, V., Mossion, A., Wielgosz-Collin, G., & Méléder, V. (2024). Comparison of different small-scale cultivation methods towards the valorization of a marine benthic diatom strain for lipid production. Algal Research, 103327. 
  • Chaumier, T., Yang, F., Manirakiza, E., Ait-Mohamed, O., Wu, Y., Chandola, U., ... & Tirichine, L. (2024). Genome-wide assessment of genetic diversity and transcript variations in 17 accessions of the model diatom Phaeodactylum tricornutum. ISME communications, 4(1), ycad008.
  • Croiset, E. Dhivert, N.N. Phuong, C. Grosbois, A. Zalouk-Vergnoux, A. Baltzer, J. Gasperi. Exploring possible controlling factors of spatial distribution of microplastics
    in sediments of a river segment (Loire River, France). Science of the Total Environment 956  177328. https://doi.org/10.1016/j.scitotenv.2024.177328 
  • Davies B, Oiry S, Rosa P, Zoffoli L, Sousa A, Thomas O, Smale D, Austen M, Biermann L, Attrill M, Roman A, Navarro G, Barillé A-L, Harin N, Clewley D, Martinez-Vicente V, Gernez P, Barillé L, 2024.Intertidal seagrass extent from Sentinel-2 time-series show distinct trajectories in Western Europe. Remote Sensing of Environment, Volume 312,114340, https://doi.org/10.1016/j.rse.2024.114340 
  • Davies B, Oiry S, Rosa P, Zoffoli L, Sousa A, Thomas O, Smale D, Austen M, Biermann L, Attrill M, Roman A, Navarro G, Barillé A-L, Harin N, Clewley D, Martinez-Vicente V, Gernez P, Barillé L, 2024. A sentinel watching over inter-tidal seagrass phenology across Western Europe and North Africa. Commun Earth Environ 5, 382 (2024). https://doi.org/10.1038/s43247-024-01543-z 
  • Davies, B. F. R., Blampied, S., Binney, F., Epstein, G., Chambers, P., & Sheehan, E. V. (2024). Carbon stocks in marine habitats across Jersey’s territorial waters. Regional Studies in Marine Science, 77, 103713.  
  • De Oliveira, T., Muresan, B., Ricordel, S., Lumière, L., Truong, X. T., Poirier, L., & Gasperi, J. (2024). Realistic assessment of tire and road wear particle emissions and their influencing factors on different types of roads. Journal of Hazardous Materials, 465, 133301
  • De Oliveira, T., Chaillou, M., Roy, S., Caubrière, N., Guillon, M., Mabilais, D., ... & Gasperi, J. (2024). Tire and road wear particles in infiltration pond sediments: Occurrence, spatial distribution, size fractionation and correlation with metals. Science Total Environment, 955, 176855
  • Haro, S., Barnett, A., Papaspyrou, S. et al. Radiative energy budgets of migrational microphytobenthic biofilms. Mar Biol 171, 204 (2024). https://doi.org/10.1007/s00227-024-04518-y 
    Huguet A., Barillé L., Soudant D., Petitgars P., Gohin F., Lefèbvre A., 2024. Identifying the spatial patterns and the drivers of the decline in the Eastern English Channel chlorophyll a surface concentration over the last two decades. Marine Pollution Bulletin 
  • Oiry, S., Davies, B. F. R., Rosa, P., Zoffoli, M. L., Brunier, G., Sousa, A. I., ... Gernez, P., & Barillé, L. (2024). Discriminating Seagrasses from Green Macroalgae in European Intertidal Areas Using High Resolution Multispectral Drone Imagery. Remote Sensing, 16:4383
  • Phuong, N.N., Duong, T.T., Pham, Q.T., Ngo, T.X.T., Nguyen, T.M.D., Le, T.P.Q., Duong, T.N., Dhivert, E., Zalouk-Vergnoux, A., Poirier, L., Gasperi, J. Anthropogenic particle abundance and characteristics in seawater and intertidal sediments of the Tonkin Bay Coast (North Vietnam). Environmental Monitoring and Assessment 196:514. https://doi.org/10.1007/s10661-024-12674-3 
  • Phuong, Q.T. Pham, T.X.T. Ngo, T.M.D. Nguyen, T.O. Doan, X.C. Nguyen, T.N. Duong, T.P.Q. Le, N.D. Le, N.A. Phuong, J. Gasperi, A. Zalouk-Vergnoux, L. Poirier, T.N. Vu, T.T. Duong. Occurrence of microplastics in bivalves from the northern coast of VietNam. Regional Studies in Marine Science 78 103731. https://doi.org/10.1016/j.rsma.2024.103731 
  • Pochic, V., Gernez, P., Zoffoli, M. L., Séchet, V., Carpentier, L., & Lacour, T. (2024). Photoacclimation in the kleptoplastidic ciliate Mesodinium rubrum and its cryptophyte prey Teleaulax amphioxeia: phenotypic variability and implications for red tide remote sensing. Journal of Plankton Research, fbad061, https://doi.org/10.1093/plankt/fbad061 
  • Renn, C., Rees, S., Rees, A., Davies, B. F., Cartwright, A. Y., Fanshawe, S., ... & Sheehan, E. V. (2024). Lessons from Lyme Bay (UK) to inform policy, management, and monitoring of Marine Protected Areas. ICES Journal of Marine Science, 81, 276-292
  • Rétif, J., Zalouk-Vergnoux, A., Kamari, A., Briant, N., Poirier, L. Trophic transfer of rare earth elements in the food web of the Loire estuary (France). Sci. Total Environ. Vol 914, 2024, 169652 
  • J. Rétif, N. Briant, A. Zalouk-Vergnoux, P. Le Monier, T. Sireau, L. Poirier. Distribution of rare earth elements and assessment of anthropogenic gadolinium in estuarine habitats: The case of Loire and Seine estuaries in France. Science of the Total Environment 922 171385. https://doi.org/10.1016/j.scitotenv.2024.171385 
  • J. Rétif, A. Zalouk-Vergnoux, N. Briant, Y. François, L. Poirier. Trophic dilution of rare earth elements along the food chain of the Seine estuary (France). Marine Pollution Bulletin 206 116671. https://doi.org/10.1016/j.marpolbul.2024.116671 
  • Rizzo, A., Ajò, A., Kang, H., De Cola, L., & Jesus, B. (2024). Development of a new kappa-carrageenan hydrogel system to study benthic diatom vertical movements. Plos one, 19(4), e0297962.
  • Román, A., Oiry, S., Davies, B., Rosa, P., Gernez, P., ... & Barillé, L. (2024). Mapping intertidal microphytobenthic biomass with very high-resolution remote sensing imagery in an estuarine system. Science of the Total Environment: 177025
  • Vignati, D. A., Martin, L. A., Poirier, L., Zalouk-Vergnoux, A., Fouque, C., Bojic, C., ... & Cossu-Leguille, C. (2024). Ecotoxicity of lanthanides to Daphnia magna: insights from elemental behavior and speciation in a standardized test medium. Peer Community Journal, 4.
  • Zarif, M., Rousselot, E., Jesus, B., Tirichine, L., & Duc, C. (2024). H3K27me3 and EZH Are Involved in the Control of the Heat-Stress-Elicited Morphological Changes in Diatoms. International Journal of Molecular Sciences, 25, 8373.

2023

  • Alevizos E., Barillé L., 2023. Global ocean spatial suitability for macroalgae offshore cultivation and sinking. Frontiers in Marine Science 10.  https://doi.org/10.3389/fmars.2023.1320642  
  • Chaumier T., Yang F., Manirakiza E., Ait-Mohamed O., Wu Y., Chandola U., Jesus B., Piganeau G., Groisillier A., Tirichine L. (2023) Genome wide assessment of genetic diversity and transcript variations in 17 accessions of the model diatom Phaeodactylum tricornutum. ISME Communications. https://www.biorxiv.org/content/10.1101/2023.05.31.543125v2.abstract  
  • Davies, B. F. R., Gernez, P., Geraud, A., Oiry, S., Rosa, P., Zoffoli, M. L., & Barillé, L. (2023). Multi-and hyperspectral classification of soft-bottom intertidal vegetation using a spectral library for coastal biodiversity remote sensing. Remote Sensing of Environment, 290, 113554. 
  • Dupont C., Baudry A., Daire M-Y., Barillé L., 2023. A technical adaptation? Shell dye extraction on the eve of the roman conquest in Gaul (Port-Blanc, Hoedic Island, France). Paléo Hors-Série Revue d'archéologie préhistorique, 144-161. https://doi.org/10.4000/paleo.8114  
  • Gernez, P., Zoffoli, M. L., Lacour, T., Fariñas, T. H., Navarro, G., Caballero, I., & Harmel, T. (2023). The many shades of red tides: Sentinel-2 optical types of highly-concentrated harmful algal blooms. Remote Sensing of Environment, 287, 113486. 
  • Hubas, C.; Gaubert-Boussarie, J.; D’Hondt, A.S.; Jesus, B.; Lamy, D.; Meleder, V.; Prins, A.; Rosa, P.; Stock, W.; Sabbe, K.. Identification of microbial exopolymer producers in sandy and muddy intertidal sediments by compound-specific isotope analysis. Peer Community Journal, Volume 3 (2023), article no. e104. doi : 10.24072/pcjournal.336. https://peercommunityjournal.org/articles/10.24072/pcjournal.336/  
  • Jesus, B., Jauffrais, T., Trampe, E., Méléder, V., Ribeiro, L., Bernhard, J.M. et al. (2023) Microscale imaging sheds light on species-specific strategies for photo-regulation and photo-acclimation of microphytobenthic diatoms. Environmental Microbiology, 1–17. Available from: https://doi.org/10.1111/1462-2920.16499  
  • Le Strat, Y., Mandin, M., Ruiz, N.  Robiou du Pont, T., Ragueneau, E.,  Barnett, A., Déléris, P. Dumay, J. Quantification of Xylanolytic and Cellulolytic
    Activities of Fungal Strains Isolated from
    Palmaria palmata to Enhance R-Phycoerythrin Extraction of Palmaria palmata: From Seaweed to Seaweed. Mar. Drugs
    2023, 21, 393. https://doi.org/10.3390/md21070393  
  • Mendes, C. R. B., Costa, R. R., Ferreira, A., Jesus B., ...& Secchi, E. R. (2023). Cryptophytes: An emerging algal group in the rapidly changing Antarctic Peninsula marine environments. Global Changes Biology Vol29(7) 1791. 
  • Mertens, K. N., Retho, M., Manach, S., Zoffoli, M. L., Doner, A., Schapira, M., ... & Gernez, P. (2023). An unprecedented bloom of Lingulodinium polyedra on the French Atlantic coast during summer 2021. Harmful Algae, 125, 102426. 
  • Moncrieffe, R., Masry, M., Cai, B., Rossignol, S., Kamari, A., Poirier, L., Bertrand, S., Wong-Wah-Chung, P., Zalouk-Vergnoux, A. (2023). Study of the ageing and the sorption of polyaromatic hydrocarbons as influencing factors on the effects of microplastics on blue mussel. Aquatic Toxicology 262, 3674. 
  • Nurdin, N., Alivzos, E., Syamsuddin, R., Asis, H., Zainuddin, E.N., H., Aris, A., Oiry, S., Brunier, G., Komatsu, T., & Barillé, L. (2023). Precision aquaculture drone mapping of the spatial distribiution of Kappaphycus alvarezii biomass and carrageenan. Remote Sensing 15, 108432. 
  • Phuong, N.N., Zalouk-Vergnoux,A., Duong, T.T., Le, T.P.Q., Poirier, L. (2023). Sorption of alkylphenols and estrogens on microplastics in marine conditions. Open Chemistry 21, 20220315. 
  • Roman, A., Prasyad, H., Oiry, S., Davies, B.,  Brunier G. & Barillé, L. (2023). Mapping intertidal oyster farms using unmanned aerial vehicles (UAV) high-resolution multispectral data. Estuarine, Coastal and Shelf Science 291, 108432. 
  • Zoffoli, M. L., Gernez, P., Oiry, S., Godet, L., Dalloyau, S., Davies, B., & Barillé, L. (2023). Remote sensing in seagrass ecology: coupled dynamics between migratory herbivorous birds and intertidal meadows observed by satellite during four decades. Remote Sensing in Ecology and Conservation. https://doi.org/10.1002/rse2.319  

2022

  • Aissioui S., Poirier L., Amara R., Ramdane Z. (2022) Concentrations of lead, cadmium and mercury in sardines, Sardina pilchardus (Walbaum, 1792) from the Algerian coast and health risks for consumers. Journal of Food Composition and Analysis, 109, 104490. 
  • Brunier G., Oiry S., Gruet Y., Dubois S., Barillé L., (2022). Topographic analysis of intertidal polychaete reefs (Sabellaria alveolata) at a very high spatial resolution. Remote Sensing, 14,307, 736116. 
  • Brunier G., Oiry S., Lachaussée N., Barillé L., Le Fouest V., and Méléder V. 2022. "A Machine-Learning Approach to Intertidal Mudflat Mapping Combining Multispectral Reflectance and Geomorphology from UAV-Based Monitoring" Remote Sensing 14, no. 22: 5857. https://doi.org/10.3390/rs14225857 
  • Joublin-Delavat A., Touahri K., Crétin P., Morot A, Rodrigues S., Jesus B., Trigodet F. and Delavat F. Genetic and physiological insights into the diazotrophic activity of a non-cyanobacterial marine diazotroph. Environ Microbiol. 2022 Oct 27. https://doi.org/10.1111/1462-2920.16261  
  • Krupandan A. G, Gernez P., Palmer S., Thomas Y., & Barillé L. (2022) Exploring South African Pacific oyster mariculture potential through combined Earth observation and bioenergetics modelling, Aquaculture Reports, 24, 101155. 
  • Le Strat, Y., Ruiz, N., Fleurence, J., Pouchus, Y; F., Déléris, P. and Dumay, J. Marine fungal abilities to enzymatically degrade algal polysaccharides, proteins and lipids: a review. J Appl Phycol (2022). https://doi.org/10.1007/s10811-022-02713-2  
  • Otero-Farina A., Retif J., Metais I., Poirier L., Chatel A. 2022. Relevance of cell subcompartmentalization techniques to predict adverse effects of metals in bivalves and fish Ecological Indicators 144 (2022) 109491 
  • Ratmaya W., Laverman A. M., Rabouille C., Akbarzadeh Z., Andrieux-Loyer F., Barillé L., Barillé A-L., Le Merrer Y., Souchu P., (2022).Temporal and spatial variations in benthic nitrogen cycling in a temperate macro-tidal coastal ecosystem:  observation and modeling. Continental Shelf Research 235 104649. 
  • Reddin C., Decottignies P., Bacouillard L., Barillé L., Dubois S., Echappé C., Gernez P., Jesus B., Méléder V., Nätscher P., Turpin V., Zeppilli D., Zwerschke N., Brind’Amour A. & Cognie B. (2022). Extensive spatial impacts of oyster reefs on an intertidal mudflat community via predator facilitation. Commun. Biol. 5: 250 
  • Rétif J., Zalouk-Vergnoux A., Briant N., Poirier L. 2022. From geochemistry to ecotoxicology of rare earth elements in aquatic environments: Diversity and uses of normalization reference materials and anomaly calculation methods. Science of the Total Environment 856 (2023) 158890 
  • Rimmer , J , Hubas , C , Wyness , A J , Jesus , B , Hartley , M , Blight , A J , Prins , A & Paterson , D 2022 , ' The response of microphytobenthos to physical disturbance, herbicide, and titanium dioxide nanoparticles exposure ' , Marine Pollution Bulletin , vol. 185 , no. Part B , 1134348 . https://doi.org/10.1016/j.marpolbul.2022.114348  
  • Rizzo, A., Ross, M. E., Norici, A., & Jesus, B. (2022). A Two-Step Process for Improved Biomass Production and Non-Destructive Astaxanthin and Carotenoids Accumulation in Haematococcus pluvialis. Applied Sciences, 12(3), 1261. 
  • Roca, M., Dunbar, M. B., Román Vázquez, A., Caballero de Frutos, I., Zoffoli, M. L., Gernez, P., & Navarro, G. (2022). Monitoring the Marine Invasive Alien Species Rugulopteryx okamurae using Unmanned Aerial Vehicles (UAVs) and Satellites. Frontiers in Marine Science, 2088.
  • Roux P., Siano R., Souchu P., Collin K., Schmitt A., Manach S., ... & Schapira, M. (2022). Spatio-temporal dynamics and biogeochemical properties of green seawater discolorations caused by the marine dinoflagellate Lepidodinium chlorophorum along southern Brittany coast. Estuarine, Coastal and Shelf Science, 275, 107950.
  • Schweizer, M., Jauffrais, T., Choquel, C., Méléder, V., Quinchard, S., & Geslin, E. (2022). Trophic strategies of intertidal foraminifera explored with single-cell microbiome metabarcoding and morphological methods: What is on the menu? Ecology and Evolution, 12, e9437. https://doi.org/10.1002/ece3.9437   
  • Thibault de Chanvalon A, Geslin E, Mojtahid M, Métais I, Méléder V, Metzger E (2022). Multiscale analysis of living benthic foraminiferal heterogeneity: Ecological advances from an intertidal mudflat (Loire estuary, France). Continental Shelf Research 232: 104627. https://doi.org/10.1016/j.csr.2021.104627 
Updated on 28 September 2026.